Gene: SL01G111990 (Solanum lycopersicum)

Overview top

Gene Identifier
SL01G111990
Transcript Identifier
SL01G111990.1
Gene Type
Coding gene
Location
ch01 : 89884535-89892993 : positive

Family

Gene family
HOM03D001508
(106 genes in 31 species)
specific family
Subfamily
ORTHO03D008139
(30 genes in 28 species)
specific family

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Descriptions

Description
Alanyl-tRNA synthetase (AHRD V1 **** Q9FFC7_ARATH)%3B contains Interpro domain(s) IPR002318 Alanyl-tRNA synthetase%2C class IIc
Description (AnnoMine)
Alanine--tRNA ligase

Identifiers

Identifier Name
pidSolyc01g111990.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006419IEAInterProalanyl-tRNA aminoacylation
GO:0043039IEAInterProtRNA aminoacylation
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G22800

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0000049IEAGenome ProjecttRNA binding
GO:0004813IEAInterProalanine-tRNA ligase activity
GO:0005524IEAInterProATP binding
GO:0016876IEAInterProligase activity, forming aminoacyl-tRNA and related compounds

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009507IEAInterProchloroplast
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G22800
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G22800
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G22800

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002318Alanine-tRNA ligase, class IIc
IPR012947Threonyl/alanyl tRNA synthetase, SAD
IPR018162Alanine-tRNA ligase, class IIc, anti-codon-binding domain
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR023033Alanine-tRNA ligase, eukaryota/bacteria
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminal
IPR003156Phosphoesterase, DHHA1
IPR027522Probable alanine--tRNA ligase, plants
IPR009000Translation protein, beta-barrel domain
IPR018165Alanyl-tRNA synthetase, class IIc, core domain

Mapman id Description
29.1.7protein.aa activation.alanine-tRNA ligase
No SignalP domains detected for this gene.