Gene: SL01G109830 (Solanum lycopersicum)

Overview top

Gene Identifier
SL01G109830
Transcript Identifier
SL01G109830.1
Gene Type
Coding gene
Location
ch01 : 88436823-88439929 : negative

Family

Gene family
HOM03D001351
(115 genes in 31 species)
specific family
Subfamily
ORTHO03D001205
(55 genes in 29 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
Thymidylate synthase (AHRD V1 ***- D8LWN8_BLAHO)%3B contains Interpro domain(s) IPR012262 Bifunctional dihydrofolate reductase/thymidylate synthase
Description (AnnoMine)
Thymidylate synthase

Identifiers

Identifier Name
pidSolyc01g109830.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006231IEAGenome ProjectdTMP biosynthetic process
GO:0009165IEAGenome Projectnucleotide biosynthetic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0006545IEAInterProglycine biosynthetic process
GO:0046073IEAPLAZA HomologydTMP metabolic processHOM03D001351

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004146IEAInterProdihydrofolate reductase activity
GO:0004799IEAInterProthymidylate synthase activity
GO:0042083IEAPLAZA Homology5,10-methylenetetrahydrofolate-dependent methyltransferase activityHOM03D001351

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT2G16370

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000398Thymidylate synthase
IPR023451Thymidylate synthase/dCMP hydroxymethylase domain
IPR024072Dihydrofolate reductase-like domain
IPR017925Dihydrofolate reductase conserved site
IPR001796Dihydrofolate reductase domain
IPR020940Thymidylate synthase, active site

Mapman id Description
25C1-metabolism
No SignalP domains detected for this gene.