Gene: SL01G107880 (Solanum lycopersicum)

Overview top

Gene Identifier
SL01G107880
Transcript Identifier
SL01G107880.1
Gene Type
Coding gene
Location
ch01 : 87028880-87035591 : negative

Family

Gene family
HOM03D002668
(68 genes in 30 species)
specific family
Subfamily
ORTHO03D003075
(39 genes in 28 species)
specific family

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Descriptions

Description
Membrane-associated ring finger 6 (AHRD V1 *--- B3VKM1_PIG)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type
Description (AnnoMine)
Probable E3 ubiquitin ligase SUD1

Identifiers

Identifier Name
pidSolyc01g107880.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1900490ISOPLAZA Integrative Orthologypositive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activityAT4G34100
GO:0008299ISOPLAZA Integrative Orthologyisoprenoid biosynthetic processAT4G34100
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT4G34100
GO:0010345ISOPLAZA Integrative Orthologysuberin biosynthetic processAT4G34100
GO:0010025ISOPLAZA Integrative Orthologywax biosynthetic processAT4G34100
GO:0010143ISOPLAZA Integrative Orthologycutin biosynthetic processAT4G34100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAGenome Projectprotein binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT4G34100

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011016Zinc finger, RING-CH-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.