Gene: SL01G098550 (Solanum lycopersicum)

Overview top

Gene Identifier
SL01G098550
Transcript Identifier
SL01G098550.1
Gene Type
Coding gene
Location
ch01 : 80797160-80802864 : positive

Family

Gene family
HOM03D002797
(65 genes in 31 species)
specific family
Subfamily
ORTHO03D002117
(44 genes in 31 species)
specific family

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Descriptions

Description
Tryptophan synthase alpha chain (AHRD V1 ***- Q8LA83_ARATH)%3B contains Interpro domain(s) IPR002028 Tryptophan synthase%2C alpha chain
Description (AnnoMine)
Tryptophan synthase alpha chain

Identifiers

Identifier Name
pidSolyc01g098550.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006568IEAGenome Projecttryptophan metabolic process
GO:0008152IEAGenome Projectmetabolic process
GO:0000162ISOPLAZA Integrative Orthologytryptophan biosynthetic processAT4G02610 AT3G54640
GO:0009630ISOPLAZA Integrative OrthologygravitropismAT3G54640
GO:0052544ISOPLAZA Integrative Orthologydefense response by callose deposition in cell wallAT3G54640
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT3G54640
GO:0006586IEAPLAZA Homologyindolalkylamine metabolic processHOM03D002797

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004834IEAInterProtryptophan synthase activity
GO:0003824IEAInterProcatalytic activity
GO:0033984ISOPLAZA Integrative Orthologyindole-3-glycerol-phosphate lyase activityAT4G02610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G02610 AT3G54640
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT4G02610
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G54640

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013785Aldolase-type TIM barrel
IPR002028Tryptophan synthase, alpha chain
IPR018204Tryptophan synthase, alpha chain, active site
IPR011060Ribulose-phosphate binding barrel

Mapman id Description
13.1.6.5.5amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase
No SignalP domains detected for this gene.