Gene: SL01G096750 (Solanum lycopersicum)

Overview top

Gene Identifier
SL01G096750
Transcript Identifier
SL01G096750.1
Gene Type
Coding gene
Location
ch01 : 79536216-79540867 : positive

Family

Gene family
HOM03D000215
(477 genes in 30 species)
specific family
Subfamily
ORTHO03D000293
(107 genes in 29 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO)%3B contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Description (AnnoMine)
Protein argonaute

Identifiers

Identifier Name
pidSolyc01g096750.1.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010529ISOPLAZA Integrative Orthologynegative regulation of transpositionAT5G21150
GO:0048481ISOPLAZA Integrative Orthologyovule developmentAT5G21150
GO:0030422ISOPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT2G32940 AT2G27040
GO:0006342ISOPLAZA Integrative Orthologychromatin silencingAT2G32940 AT2G27040
GO:0006306ISOPLAZA Integrative OrthologyDNA methylationAT2G32940 AT2G27040
GO:0031048ISOPLAZA Integrative Orthologychromatin silencing by small RNAAT2G27040
GO:0010495ISOPLAZA Integrative Orthologylong-distance posttranscriptional gene silencingAT2G27040
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT2G27040
GO:0051567ISOPLAZA Integrative Orthologyhistone H3-K9 methylationAT2G27040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0019899IEAGenome Projectenzyme binding
GO:0005515IEAInterProprotein binding
GO:0035197ISOPLAZA Integrative OrthologysiRNA bindingAT5G21150 AT2G32940 AT2G27040

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G21150
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G32940
GO:0005719ISOPLAZA Integrative Orthologynuclear euchromatinAT2G27040
GO:0015030ISOPLAZA Integrative OrthologyCajal bodyAT2G27040
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT2G27040

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003165Stem cell self-renewal protein Piwi
IPR003100Argonaute/Dicer protein, PAZ domain
IPR014811Domain of unknown function DUF1785
IPR012337Ribonuclease H-like domain

Mapman id Description
27.3.36RNA.regulation of transcription.Argonaute
No SignalP domains detected for this gene.