Gene: SL01G095830 (Solanum lycopersicum)
Overview 
- Gene Identifier
- SL01G095830
- Transcript Identifier
- SL01G095830.1
- Gene Type
- Coding gene
- Location
- ch01 : 78753338-78754949 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Tandem duplicate and Block duplicate
Descriptions
- Description
-
Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type
- Description (AnnoMine)
-
Putative RING-H2 finger protein ATL21A
Identifiers
Identifier | Name |
---|---|
pid | Solyc01g095830.2.1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0008270 | IEA | Genome Project | zinc ion binding | |
GO:0005515 | IEA | InterPro | protein binding | |
GO:0030247 | IEA | InterPro | polysaccharide binding |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
29.5.11.4.2 | protein.degradation.ubiquitin.E3.RING |
SignalP | Description |
---|---|
SignalP-noTM | Signal Peptide detected using noTM network |