Gene: SL01G080530 (Solanum lycopersicum)

Overview top

Gene Identifier
SL01G080530
Transcript Identifier
SL01G080530.1
Gene Type
Coding gene
Location
ch01 : 72279576-72287699 : positive

Family

Gene family
HOM03D000319
(368 genes in 31 species)
specific family
Subfamily
ORTHO03D003009
(39 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q8LAN3_ARATH)%3B contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase%2C alpha subunit
Description (AnnoMine)
Prolyl 4-hydroxylase subunit alpha

Identifiers

Identifier Name
pidSolyc01g080530.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000319

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0004656IEAGenome Projectprocollagen-proline 4-dioxygenase activity
GO:0031418IEAInterProL-ascorbic acid binding
GO:0005506IEAInterProiron ion binding
GO:0016706IEAInterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016705IEAInterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031406IEAPLAZA Homologycarboxylic acid bindingHOM03D000319
GO:0043177IEAPLAZA Homologyorganic acid bindingHOM03D000319
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000319
GO:0043169IEAPLAZA Homologycation bindingHOM03D000319
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000319
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000319
GO:0019842IEAPLAZA Homologyvitamin bindingHOM03D000319
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000319
GO:0030246IEAPLAZA Homologycarbohydrate bindingHOM03D000319
GO:0048029IEAPLAZA Homologymonosaccharide bindingHOM03D000319

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT5G18900
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT5G18900
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G18900
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G18900

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005123Oxoglutarate/iron-dependent dioxygenase
IPR003582ShKT domain
IPR006620Prolyl 4-hydroxylase, alpha subunit

Mapman id Description
26.7misc.oxidases - copper, flavone etc
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network