Gene: RC29889G00650 (Ricinus communis)

Overview top

Gene Identifier
RC29889G00650
Transcript Identifier
RC29889G00650.1
Gene Type
Coding gene
Location
29889 : 284820-289596 : positive

Family

Gene family
HOM03D001754
(94 genes in 30 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
ATP-citrate synthase beta chain protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
gene29889.t000066
name29889.m003300

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0044262IEAGenome Projectcellular carbohydrate metabolic process
GO:0006085ISOPLAZA Integrative Orthologyacetyl-CoA biosynthetic processAT5G49460 AT3G06650

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0005488IEAGenome Projectbinding
GO:0046912IEAGenome Projecttransferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO:0003878IEAInterProATP citrate synthase activity
GO:0004775IEAInterProsuccinate-CoA ligase (ADP-forming) activity
GO:0004774IEAPLAZA Homologysuccinate-CoA ligase activityHOM03D001754

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G49460
GO:0009346ISOPLAZA Integrative Orthologycitrate lyase complexAT5G49460
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G49460 AT3G06650
GO:0016020ISOPLAZA Integrative OrthologymembraneAT3G06650

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005810Succinyl-CoA ligase, alpha subunit
IPR016142Citrate synthase-like, large alpha subdomain
IPR016102Succinyl-CoA synthetase-like
IPR017440ATP-citrate lyase/succinyl-CoA ligase, active site
IPR017866Succinyl-CoA synthetase, beta subunit, conserved site
IPR016141Citrate synthase-like, core
IPR016143Citrate synthase-like, small alpha subdomain
IPR016040NAD(P)-binding domain
IPR002020Citrate synthase-like
IPR005811ATP-citrate lyase/succinyl-CoA ligase

Mapman id Description
8.2.11TCA / org transformation.other organic acid transformatons.atp-citrate lyase
No SignalP domains detected for this gene.