Gene: RC29844G01300 (Ricinus communis)

Overview top

Gene Identifier
RC29844G01300
Transcript Identifier
RC29844G01300.1
Gene Type
Coding gene
Location
29844 : 778590-780864 : negative

Family

Gene family
HOM03D000333
(354 genes in 31 species)
specific family
Subfamily
ORTHO03D004030
(36 genes in 21 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Bifunctional cystathionine gamma-lyase/cysteine synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
gene29844.t000131
name29844.m003285

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0006535IEAGenome Projectcysteine biosynthetic process from serine
GO:0019344ISOPLAZA Integrative Orthologycysteine biosynthetic processAT4G14880
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G14880
GO:0007568ISOPLAZA Integrative OrthologyagingAT4G14880
GO:0010043ISOPLAZA Integrative Orthologyresponse to zinc ionAT3G22460
GO:0006790IEAPLAZA Homologysulfur compound metabolic processHOM03D000333
GO:0006534IEAPLAZA Homologycysteine metabolic processHOM03D000333
GO:0009069IEAPLAZA Homologyserine family amino acid metabolic processHOM03D000333
GO:0044283IEAPLAZA Homologysmall molecule biosynthetic processHOM03D000333
GO:0044281IEAPLAZA Homologysmall molecule metabolic processHOM03D000333
GO:0043436IEAPLAZA Homologyoxoacid metabolic processHOM03D000333
GO:0016053IEAPLAZA Homologyorganic acid biosynthetic processHOM03D000333
GO:0044711IEAPLAZA Homologysingle-organism biosynthetic processHOM03D000333
GO:1901564IEAPLAZA Homologyorganonitrogen compound metabolic processHOM03D000333
GO:0006520IEAPLAZA Homologycellular amino acid metabolic processHOM03D000333
GO:1901566IEAPLAZA Homologyorganonitrogen compound biosynthetic processHOM03D000333
GO:1901605IEAPLAZA Homologyalpha-amino acid metabolic processHOM03D000333
GO:0044272IEAPLAZA Homologysulfur compound biosynthetic processHOM03D000333
GO:1901607IEAPLAZA Homologyalpha-amino acid biosynthetic processHOM03D000333
GO:0008652IEAPLAZA Homologycellular amino acid biosynthetic processHOM03D000333
GO:0006082IEAPLAZA Homologyorganic acid metabolic processHOM03D000333
GO:0000096IEAPLAZA Homologysulfur amino acid metabolic processHOM03D000333
GO:0000097IEAPLAZA Homologysulfur amino acid biosynthetic processHOM03D000333
GO:0009070IEAPLAZA Homologyserine family amino acid biosynthetic processHOM03D000333
GO:0006563IEAPLAZA HomologyL-serine metabolic processHOM03D000333
GO:0046394IEAPLAZA Homologycarboxylic acid biosynthetic processHOM03D000333
GO:0019752IEAPLAZA Homologycarboxylic acid metabolic processHOM03D000333

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0030170IEAGenome Projectpyridoxal phosphate binding
GO:0004124IEAGenome Projectcysteine synthase activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G14880
GO:0016835IEAPLAZA Homologycarbon-oxygen lyase activityHOM03D000333
GO:0016829IEAPLAZA Homologylyase activityHOM03D000333

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G14880
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT4G14880
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT4G14880
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G14880
GO:0005777ISOPLAZA Integrative OrthologyperoxisomeAT4G14880
GO:0016020ISOPLAZA Integrative OrthologymembraneAT4G14880
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G14880
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT4G14880
GO:0005634ISOPLAZA Integrative OrthologynucleusAT4G14880

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005859Cysteine synthase A
IPR001216Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
IPR005856Cysteine synthase K/M

Mapman id Description
13.1.5.3.1amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL
No SignalP domains detected for this gene.