PLAZA 3.0 Dicots gene overview : RC29668G00160

Gene: RC29668G00160 (Ricinus communis)

Overview

Gene Identifier: RC29668G00160
Transcript Identifier: RC29668G00160.1
Gene Type: Coding gene
Location: 29668 : 247267-257373 : positive

Family

Gene family: HOM03D002631
(69 genes in 30 species)
specific family
Subfamily: ORTHO03D011356
(23 genes in 21 species)
specific family

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Descriptions

Description: Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1

Description (AnnoMine): Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1

Identifiers

Identifier	Name
gene	29668.t000017
name	29668.m000328
uniprot	B9SQI7

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0019509	IEA	Genome Project	L-methionine salvage from methylthioadenosine	1
GO:0008152	IEA	Genome Project	metabolic process
GO:0043102	IEA	PLAZA Homology	amino acid salvage	HOM03D002631

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0043874	IEA	Genome Project	acireductone synthase activity	1
GO:0046872	IEA	Genome Project	metal ion binding
GO:0008967	IEA	Genome Project	phosphoglycolate phosphatase activity
GO:0000287	IEA	UniProt	magnesium ion binding	1
GO:0016787	IEA	InterPro	hydrolase activity
GO:0046570	IEA	UniProt	methylthioribulose 1-phosphate dehydratase activity	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	UniProt	cytoplasm	1
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G53850
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G53850
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT5G53850

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR027505	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1
IPR001303	Class II aldolase/adducin N-terminal
IPR023214	HAD-like domain
IPR017714	Methylthioribulose-1-phosphate dehydratase
IPR006439	HAD hydrolase, subfamily IA
IPR027514	Methylthioribulose-1-phosphate dehydratase, eukaryotes
IPR023943	Enolase-phosphatase E1

Mapman id	Description
3.5	minor CHO metabolism.others

No SignalP domains detected for this gene.