Gene: RC28725G00120 (Ricinus communis)

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Gene Identifier
RC28725G00120
Transcript Identifier
RC28725G00120.1
Gene Type
Coding gene
Location
28725 : 134531-143983 : positive

Family

Gene family
HOM03D000476
(268 genes in 30 species)
specific family
Subfamily
ORTHO03D004319
(36 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
Probable Werner syndrome ATP-dependent helicase homolog 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
gene28725.t000012
name28725.m000320

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006310IEAGenome ProjectDNA recombination
GO:0044237IEAGenome Projectcellular metabolic process
GO:0006260IEAInterProDNA replication
GO:0006281IEAInterProDNA repair
GO:0070417ISOPLAZA Integrative Orthologycellular response to coldAT1G60930 AT1G10930
GO:0051276ISOPLAZA Integrative Orthologychromosome organizationAT1G10930
GO:0006974ISOPLAZA Integrative Orthologycellular response to DNA damage stimulusAT1G10930
GO:0000723ISOPLAZA Integrative Orthologytelomere maintenanceAT1G10930
GO:0000724ISOPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationAT1G10930
GO:0071215ISOPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT1G10930

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004386IEAGenome Projecthelicase activity
GO:0005524IEAGenome ProjectATP binding
GO:0008026IEAGenome ProjectATP-dependent helicase activity
GO:0000166IEAGenome Projectnucleotide binding
GO:0003824IEAGenome Projectcatalytic activity
GO:0043140IEAInterProATP-dependent 3'-5' DNA helicase activity
GO:0043138ISOPLAZA Integrative Orthology3'-5' DNA helicase activityAT1G10930
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03D000476
GO:0016887IEAPLAZA HomologyATPase activityHOM03D000476
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03D000476

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT1G10930

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001650Helicase, C-terminal
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR002121HRDC domain
IPR018982RQC domain
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR010997HRDC-like
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR004589DNA helicase, ATP-dependent, RecQ type

Mapman id Description
28.99DNA.unspecified
No SignalP domains detected for this gene.