Gene: PT19G09390 (Populus trichocarpa)

Overview top

Gene Identifier
PT19G09390
Transcript Identifier
PT19G09390.1
Gene Type
Coding gene
Location
Chr19 : 12389867-12390895 : negative

Family

Gene family
HOM03D000239
(447 genes in 29 species)
specific family
Subfamily
ORTHO03D017320
(9 genes in 4 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Basic endochitinase CHB4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.019G093900.1
idPAC:27026900

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006032IEAGenome Projectchitin catabolic process
GO:0016998IEAGenome Projectcell wall macromolecule catabolic process
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000239
GO:0006030IEAPLAZA Homologychitin metabolic processHOM03D000239
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000239
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000239
GO:0046348IEAPLAZA Homologyamino sugar catabolic processHOM03D000239
GO:0071554IEAPLAZA Homologycell wall organization or biogenesisHOM03D000239
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000239
GO:1901565IEAPLAZA Homologyorganonitrogen compound catabolic processHOM03D000239
GO:1901564IEAPLAZA Homologyorganonitrogen compound metabolic processHOM03D000239
GO:0044036IEAPLAZA Homologycell wall macromolecule metabolic processHOM03D000239
GO:0006040IEAPLAZA Homologyamino sugar metabolic processHOM03D000239
GO:0006026IEAPLAZA Homologyaminoglycan catabolic processHOM03D000239
GO:1901136IEAPLAZA Homologycarbohydrate derivative catabolic processHOM03D000239
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000239
GO:1901135IEAPLAZA Homologycarbohydrate derivative metabolic processHOM03D000239
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000239
GO:0006022IEAPLAZA Homologyaminoglycan metabolic processHOM03D000239
GO:1901072IEAPLAZA Homologyglucosamine-containing compound catabolic processHOM03D000239
GO:1901071IEAPLAZA Homologyglucosamine-containing compound metabolic processHOM03D000239
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000239

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004568IEAGenome Projectchitinase activity
GO:0008061IEAGenome Projectchitin binding
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000239
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000239
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000239

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT2G43610

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001002Chitin-binding, type 1
IPR000726Glycoside hydrolase, family 19, catalytic
IPR023346Lysozyme-like domain
IPR018371Chitin-binding, type 1, conserved site

Mapman id Description
20.1stress.biotic
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network