Gene: PT18G12810 (Populus trichocarpa)

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Gene Identifier
PT18G12810
Transcript Identifier
PT18G12810.1
Gene Type
Coding gene
Location
Chr18 : 15036712-15039978 : negative

Family

Gene family
HOM03D001254
(123 genes in 31 species)
specific family
Subfamily
ORTHO03D002288
(42 genes in 28 species)
specific family

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Descriptions

Description (AnnoMine)
Uncharacterized RING finger protein EEED8.16
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.018G128100.1
idPAC:27010365

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT2G42160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAInterProprotein binding
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT2G42160
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G42160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT2G42160

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001607Zinc finger, UBP-type
IPR001841Zinc finger, RING-type
IPR011422BRCA1-associated 2
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019786Zinc finger, PHD-type, conserved site

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.