Gene: PT18G09060 (Populus trichocarpa)

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Gene Identifier
PT18G09060
Transcript Identifier
PT18G09060.1
Gene Type
Coding gene
Location
Chr18 : 11966672-11973113 : negative

Family

Gene family
HOM03D001316
(118 genes in 31 species)
specific family
Subfamily
ORTHO03D001693
(47 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Lysine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.018G090600.1
idPAC:27008829

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006430IEAInterProlysyl-tRNA aminoacylation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004824IEAInterProlysine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT3G11710
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G11710

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012340Nucleic acid-binding, OB-fold
IPR018149Lysyl-tRNA synthetase, class II, C-terminal
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR002313Lysine-tRNA ligase, class II
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR006195Aminoacyl-tRNA synthetase, class II

Mapman id Description
29.1.6protein.aa activation.lysine-tRNA ligase
No SignalP domains detected for this gene.