Gene: PT15G03060 (Populus trichocarpa)

Overview top

Gene Identifier
PT15G03060
Transcript Identifier
PT15G03060.1
Gene Type
Coding gene
Location
Chr15 : 2454357-2458369 : negative

Family

Gene family
HOM03D004973
(41 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
dihydropyrimidine dehydrogenase subunit PreA
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.015G030600.1
idPAC:27018400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006222IEAGenome ProjectUMP biosynthetic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0043562ISOPLAZA Integrative Orthologycellular response to nitrogen levelsAT3G17810
GO:0006212ISOPLAZA Integrative Orthologyuracil catabolic processAT3G17810
GO:0009174IEAPLAZA Homologypyrimidine ribonucleoside monophosphate biosynthetic processHOM03D004973
GO:0046049IEAPLAZA HomologyUMP metabolic processHOM03D004973

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004152IEAGenome Projectdihydroorotate dehydrogenase activity
GO:0003824IEAInterProcatalytic activity
GO:0004158IEAInterProdihydroorotate oxidase activity
GO:0017113ISOPLAZA Integrative Orthologydihydropyrimidine dehydrogenase (NADP+) activityAT3G17810

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G17810
GO:0009536ISOPLAZA Integrative OrthologyplastidAT3G17810
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G17810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012135Dihydroorotate dehydrogenase, class 1/ 2
IPR005720Dihydroorotate dehydrogenase domain
IPR013785Aldolase-type TIM barrel

Mapman id Description
23.2.1.3nucleotide metabolism.degradation.pyrimidine.dihydrouracil dehydrogenase
No SignalP domains detected for this gene.