Gene: PT10G22420 (Populus trichocarpa)

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Gene Identifier
PT10G22420
Transcript Identifier
PT10G22420.1
Gene Type
Coding gene
Location
Chr10 : 20822462-20825623 : positive

Family

Gene family
HOM03D000589
(229 genes in 29 species)
specific family
Subfamily
ORTHO03D000081
(195 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Phenylalanine ammonia-lyase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G224200.1
idPAC:26979334

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAGenome Projectbiosynthetic process
GO:0006559IEAInterProL-phenylalanine catabolic process
GO:0009611ISOPLAZA Tree-based Orthologyresponse to woundingAT2G37040 AT3G53260
GO:0006952ISOPLAZA Tree-based Orthologydefense responseAT2G37040 AT3G53260
GO:0046274ISOPLAZA Tree-based Orthologylignin catabolic processAT2G37040
GO:0046244ISOPLAZA Tree-based Orthologysalicylic acid catabolic processAT2G37040
GO:0010224ISOPLAZA Tree-based Orthologyresponse to UV-BAT2G37040
GO:0009819ISOPLAZA Tree-based Orthologydrought recoveryAT2G37040
GO:0009555ISOPLAZA Tree-based Orthologypollen developmentAT2G37040
GO:0080167ISOPLAZA Tree-based Orthologyresponse to karrikinAT2G37040 AT3G53260
GO:0006979ISOPLAZA Tree-based Orthologyresponse to oxidative stressAT2G37040 AT3G53260
GO:0009699ISOPLAZA Tree-based Orthologyphenylpropanoid biosynthetic processAT2G37040 AT3G53260
GO:0044282IEAPLAZA Homologysmall molecule catabolic processHOM03D000589
GO:0009063IEAPLAZA Homologycellular amino acid catabolic processHOM03D000589
GO:1902221IEAPLAZA Homologyerythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic processHOM03D000589
GO:1902222IEAPLAZA Homologyerythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic processHOM03D000589
GO:0016054IEAPLAZA Homologyorganic acid catabolic processHOM03D000589
GO:0006558IEAPLAZA HomologyL-phenylalanine metabolic processHOM03D000589
GO:0019439IEAPLAZA Homologyaromatic compound catabolic processHOM03D000589
GO:1901605IEAPLAZA Homologyalpha-amino acid metabolic processHOM03D000589
GO:1901606IEAPLAZA Homologyalpha-amino acid catabolic processHOM03D000589
GO:0009072IEAPLAZA Homologyaromatic amino acid family metabolic processHOM03D000589
GO:0009074IEAPLAZA Homologyaromatic amino acid family catabolic processHOM03D000589
GO:0046395IEAPLAZA Homologycarboxylic acid catabolic processHOM03D000589

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016841IEAGenome Projectammonia-lyase activity
GO:0003824IEAInterProcatalytic activity
GO:0045548ISOPLAZA Tree-based Orthologyphenylalanine ammonia-lyase activityAT2G37040 AT3G53260
GO:0016840IEAPLAZA Homologycarbon-nitrogen lyase activityHOM03D000589
GO:0016829IEAPLAZA Homologylyase activityHOM03D000589

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT3G53260

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001106Aromatic amino acid lyase
IPR005922Phenylalanine ammonia-lyase
IPR022313Phenylalanine/histidine ammonia-lyases, active site
IPR023144Phenylalanine ammonia-lyase, shielding domain
IPR008948L-Aspartase-like
IPR024083Fumarase/histidase, N-terminal

Mapman id Description
16.2.1.1secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL
No SignalP domains detected for this gene.