Gene: PT10G16280 (Populus trichocarpa)

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Gene Identifier
PT10G16280
Transcript Identifier
PT10G16280.1
Gene Type
Coding gene
Location
Chr10 : 16757693-16759533 : positive

Family

Gene family
HOM03D001256
(123 genes in 31 species)
specific family
Subfamily
ORTHO03D017742
(9 genes in 8 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Eukaryotic translation initiation factor 5A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G162800.1
idPAC:26981508

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006452IEAGenome Projecttranslational frameshifting
GO:0045901IEAGenome Projectpositive regulation of translational elongation
GO:0045905IEAGenome Projectpositive regulation of translational termination
GO:0008612IEAGenome Projectpeptidyl-lysine modification to hypusine
GO:0006448IEAPLAZA Homologyregulation of translational elongationHOM03D001256
GO:0006449IEAPLAZA Homologyregulation of translational terminationHOM03D001256
GO:0043624IEAPLAZA Homologycellular protein complex disassemblyHOM03D001256
GO:0042398IEAPLAZA Homologycellular modified amino acid biosynthetic processHOM03D001256
GO:0032268IEAPLAZA Homologyregulation of cellular protein metabolic processHOM03D001256
GO:0032270IEAPLAZA Homologypositive regulation of cellular protein metabolic processHOM03D001256
GO:0046516IEAPLAZA Homologyhypusine metabolic processHOM03D001256
GO:0051130IEAPLAZA Homologypositive regulation of cellular component organizationHOM03D001256
GO:0045727IEAPLAZA Homologypositive regulation of translationHOM03D001256
GO:0006415IEAPLAZA Homologytranslational terminationHOM03D001256
GO:0006417IEAPLAZA Homologyregulation of translationHOM03D001256
GO:0051128IEAPLAZA Homologyregulation of cellular component organizationHOM03D001256
GO:0018205IEAPLAZA Homologypeptidyl-lysine modificationHOM03D001256
GO:0006414IEAPLAZA Homologytranslational elongationHOM03D001256
GO:0051247IEAPLAZA Homologypositive regulation of protein metabolic processHOM03D001256
GO:0051246IEAPLAZA Homologyregulation of protein metabolic processHOM03D001256
GO:0043241IEAPLAZA Homologyprotein complex disassemblyHOM03D001256
GO:0010557IEAPLAZA Homologypositive regulation of macromolecule biosynthetic processHOM03D001256
GO:0009891IEAPLAZA Homologypositive regulation of biosynthetic processHOM03D001256
GO:0009893IEAPLAZA Homologypositive regulation of metabolic processHOM03D001256
GO:0010608IEAPLAZA Homologyposttranscriptional regulation of gene expressionHOM03D001256
GO:0010604IEAPLAZA Homologypositive regulation of macromolecule metabolic processHOM03D001256
GO:0022411IEAPLAZA Homologycellular component disassemblyHOM03D001256
GO:0048518IEAPLAZA Homologypositive regulation of biological processHOM03D001256
GO:0043244IEAPLAZA Homologyregulation of protein complex disassemblyHOM03D001256
GO:0048522IEAPLAZA Homologypositive regulation of cellular processHOM03D001256
GO:0043243IEAPLAZA Homologypositive regulation of protein complex disassemblyHOM03D001256
GO:0018193IEAPLAZA Homologypeptidyl-amino acid modificationHOM03D001256
GO:0031325IEAPLAZA Homologypositive regulation of cellular metabolic processHOM03D001256
GO:0032984IEAPLAZA Homologymacromolecular complex disassemblyHOM03D001256
GO:0031328IEAPLAZA Homologypositive regulation of cellular biosynthetic processHOM03D001256

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEAGenome ProjectRNA binding
GO:0003746IEAGenome Projecttranslation elongation factor activity
GO:0043022IEAGenome Projectribosome binding
GO:0043021IEAPLAZA Homologyribonucleoprotein complex bindingHOM03D001256

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012340Nucleic acid-binding, OB-fold
IPR019769Translation elongation factor, IF5A, hypusine site
IPR014722Ribosomal protein L2 domain 2
IPR020189Translation elongation factor, IF5A C-terminal
IPR008991Translation protein SH3-like domain
IPR001884Translation elongation factor IF5A

Mapman id Description
29.2.3protein.synthesis.initiation
No SignalP domains detected for this gene.