Gene: PT10G09230 (Populus trichocarpa)

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Gene Identifier
PT10G09230
Transcript Identifier
PT10G09230.1
Gene Type
Coding gene
Location
Chr10 : 11546864-11549636 : positive

Family

Gene family
HOM03D001354
(115 genes in 29 species)
specific family
Subfamily
ORTHO03D009338
(28 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
protein ligase RHF1A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G092300.1
idPAC:26982454

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055046ISOPLAZA Integrative OrthologymicrogametogenesisAT4G14220
GO:0051726ISOPLAZA Integrative Orthologyregulation of cell cycleAT4G14220
GO:0010498ISOPLAZA Integrative Orthologyproteasomal protein catabolic processAT4G14220
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT4G14220
GO:0009561ISOPLAZA Integrative OrthologymegagametogenesisAT4G14220

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT4G14220

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020ISOPLAZA Integrative OrthologymembraneAT4G14220

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.