Gene: PT09G08060 (Populus trichocarpa)

Overview top

Gene Identifier
PT09G08060
Transcript Identifier
PT09G08060.1
Gene Type
Coding gene
Location
Chr09 : 7686949-7689778 : negative

Family

Gene family
HOM03D002178
(79 genes in 31 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Probable glutamyl-tRNA reductase 3, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.009G080600.1
idPAC:26987595

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0033014IEAGenome Projecttetrapyrrole biosynthetic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0006098IEAGenome Projectpentose-phosphate shunt
GO:0009416ISOPLAZA Tree-based Orthologyresponse to light stimulusAT1G58290
GO:0015995ISOPLAZA Tree-based Orthologychlorophyll biosynthetic processAT1G58290
GO:0006979ISOPLAZA Tree-based Orthologyresponse to oxidative stressAT1G09940
GO:0006783ISOPLAZA Tree-based Orthologyheme biosynthetic processAT1G09940 AT1G58290

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008883IEAGenome Projectglutamyl-tRNA reductase activity
GO:0050661IEAGenome ProjectNADP binding
GO:0004616IEAGenome Projectphosphogluconate dehydrogenase (decarboxylating) activity
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0004764IEAGenome Projectshikimate 3-dehydrogenase (NADP+) activity
GO:0005515ISOPLAZA Tree-based Orthologyprotein bindingAT1G58290

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009507ISOPLAZA Tree-based OrthologychloroplastAT1G58290

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015896Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain
IPR015895Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal
IPR000343Tetrapyrrole biosynthesis, glutamyl-tRNA reductase
IPR016040NAD(P)-binding domain
IPR006151Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

Mapman id Description
19.2tetrapyrrole synthesis.glu-tRNA reductase
No SignalP domains detected for this gene.