Gene: PT07G00340 (Populus trichocarpa)

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Gene Identifier
PT07G00340
Transcript Identifier
PT07G00340.1
Gene Type
Coding gene
Location
Chr07 : 242739-251627 : positive

Family

Gene family
HOM03D000612
(222 genes in 31 species)
specific family
Subfamily
ORTHO03D000593
(75 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Probable histone acetyltransferase HAC-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.007G003400.1
idPAC:27015381

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006473ISOPLAZA Integrative Orthologyprotein acetylationAT3G12980 AT1G79000 AT1G16710
GO:0009908ISOPLAZA Integrative Orthologyflower developmentAT3G12980 AT1G79000 AT1G16710
GO:0009294ISOPLAZA Integrative OrthologyDNA mediated transformationAT1G79000
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT1G79000
GO:0006357ISOPLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoterAT1G79000
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000612

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAGenome Projectprotein binding
GO:0003712IEAGenome Projecttranscription cofactor activity
GO:0004402IEAGenome Projecthistone acetyltransferase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000433Zinc finger, ZZ-type
IPR000197Zinc finger, TAZ-type
IPR019787Zinc finger, PHD-finger
IPR013178Histone H3-K56 acetyltransferase, RTT109
IPR011011Zinc finger, FYVE/PHD-type
IPR019786Zinc finger, PHD-type, conserved site
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
27.3.54RNA.regulation of transcription.Histone acetyltransferases
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBTAZ