Gene: PT06G07820 (Populus trichocarpa)

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Gene Identifier
PT06G07820
Transcript Identifier
PT06G07820.1
Gene Type
Coding gene
Location
Chr06 : 5917739-5926522 : positive

Family

Gene family
HOM03D000972
(152 genes in 31 species)
specific family
Subfamily
ORTHO03D003966
(36 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Biotin carboxylase 1, chloroplastic
Description (AnnoMine)
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial

Identifiers

Identifier Name
pidPotri.006G078200.1
idPAC:27007174
uniprotB9HBA8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0006633IEAUniProtfatty acid biosynthetic process1
GO:2001295IEAUniProtmalonyl-CoA biosynthetic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0016874IEAGenome Projectligase activity
GO:0005524IEAGenome ProjectATP binding1
GO:0008716IEAGenome ProjectD-alanine-D-alanine ligase activity
GO:0004075IEAUniProtbiotin carboxylase activity1
GO:0046872IEAUniProtmetal ion binding1
GO:0003989IEAUniProtacetyl-CoA carboxylase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IEAUniProtchloroplast1
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G35360
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT5G35360

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005479Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
IPR005481Carbamoyl-phosphate synthase, large subunit, N-terminal
IPR011761ATP-grasp fold
IPR004549Acetyl-CoA carboxylase, biotin carboxylase
IPR005482Biotin carboxylase, C-terminal
IPR016185Pre-ATP-grasp domain
IPR013815ATP-grasp fold, subdomain 1
IPR011764Biotin carboxylation domain
IPR013816ATP-grasp fold, subdomain 2
IPR011054Rudiment single hybrid motif

Mapman id Description
11.1.1.2.4lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase
No SignalP domains detected for this gene.