Gene: PT05G23170 (Populus trichocarpa)

Overview top

Gene Identifier
PT05G23170
Transcript Identifier
PT05G23170.1
Gene Type
Coding gene
Location
Chr05 : 24021010-24023748 : negative

Family

Gene family
HOM03D000022
(2181 genes in 31 species)
specific family
Subfamily
ORTHO03D002723
(40 genes in 25 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
26S protease regulatory subunit
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.005G231700.1
idPAC:27028320

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAGenome ProjectDNA repair
GO:0006310IEAGenome ProjectDNA recombination
GO:0030163IEAInterProprotein catabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0009378IEAGenome Projectfour-way junction helicase activity
GO:0016887IEAGenome ProjectATPase activity
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0016787IEAInterProhydrolase activity
GO:0000166IEAInterPronucleotide binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000022
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000022
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000022
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000022
GO:0043167IEAPLAZA Homologyion bindingHOM03D000022
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000022
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000022
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000022
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000022
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000022
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000022
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000022
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000022
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000022
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000022
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000022
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000022
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000022
GO:0005488IEAPLAZA HomologybindingHOM03D000022
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000022
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000022
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000022

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT1G45000
GO:0000502ISOPLAZA Integrative Orthologyproteasome complexAT1G45000
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G45000
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G45000
GO:0005618ISOPLAZA Integrative Orthologycell wallAT1G45000
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT1G45000

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003959ATPase, AAA-type, core
IPR003960ATPase, AAA-type, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003593AAA+ ATPase domain
IPR00593726S proteasome subunit P45

Mapman id Description
29.5.11.20protein.degradation.ubiquitin.proteasom
No SignalP domains detected for this gene.