Gene: PT05G00500 (Populus trichocarpa)

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Gene Identifier
PT05G00500
Transcript Identifier
PT05G00500.1
Gene Type
Coding gene
Location
Chr05 : 298164-301585 : positive

Family

Gene family
HOM03D002855
(64 genes in 30 species)
specific family
Subfamily
ORTHO03D001292
(53 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
FACT complex subunit SPT16
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.005G005000.1
idPAC:27030186

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009987IEAGenome Projectcellular process
GO:0010228ISOPLAZA Tree-based Orthologyvegetative to reproductive phase transition of meristemAT4G10710

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0035101ISOPLAZA Tree-based OrthologyFACT complexAT4G10710
GO:0005719ISOPLAZA Tree-based Orthologynuclear euchromatinAT4G10710
GO:0005730ISOPLAZA Tree-based OrthologynucleolusAT4G10710

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013953FACT complex subunit Spt16p/Cdc68p
IPR000994Peptidase M24, structural domain
IPR013719Domain of unknown function DUF1747

Mapman id Description
27.3.52RNA.regulation of transcription.Global transcription factor group
No SignalP domains detected for this gene.