Gene: PT04G16720 (Populus trichocarpa)

Overview top

Gene Identifier
PT04G16720
Transcript Identifier
PT04G16720.1
Gene Type
Coding gene
Location
Chr04 : 18691722-18695859 : positive

Family

Gene family
HOM03D003738
(50 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.004G167200.1
idPAC:26993020

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009116IEAGenome Projectnucleoside metabolic process
GO:0019509ISOPLAZA Integrative OrthologyL-methionine salvage from methylthioadenosineAT4G34840 AT4G38800
GO:0000003ISOPLAZA Integrative OrthologyreproductionAT4G34840 AT4G38800
GO:0001944ISOPLAZA Integrative Orthologyvasculature developmentAT4G34840 AT4G38800
GO:0019284ISOPLAZA Integrative OrthologyL-methionine biosynthetic process from S-adenosylmethionineOS06G02220
GO:0030912ISOPLAZA Integrative Orthologyresponse to deep waterOS06G02220
GO:0009693ISOPLAZA Integrative Orthologyethylene biosynthetic processOS06G02220
GO:0009086ISOPLAZA Integrative Orthologymethionine biosynthetic processOS06G02220

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0008930ISOPLAZA Integrative Orthologymethylthioadenosine nucleosidase activityAT4G34840 AT4G38800 OS06G02220

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G38800
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G38800

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000845Nucleoside phosphorylase domain
IPR018017Nucleoside phosphorylase

Mapman id Description
13.1.3.4amino acid metabolism.synthesis.aspartate family.methionine
No SignalP domains detected for this gene.