Gene: PT02G25280 (Populus trichocarpa)

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Gene Identifier
PT02G25280
Transcript Identifier
PT02G25280.1
Gene Type
Coding gene
Location
Chr02 : 24187945-24192667 : negative

Family

Gene family
HOM03D000046
(1586 genes in 29 species)
specific family
Subfamily
ORTHO03D006694
(32 genes in 24 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Transcription factor PIF1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.002G252800.1
idPAC:27021644

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0010161ISOPLAZA Integrative Orthologyred light signaling pathwayAT2G20180
GO:0006783ISOPLAZA Integrative Orthologyheme biosynthetic processAT2G20180
GO:0010100ISOPLAZA Integrative Orthologynegative regulation of photomorphogenesisAT2G20180
GO:0009740ISOPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT2G20180
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT2G20180
GO:0010099ISOPLAZA Integrative Orthologyregulation of photomorphogenesisAT2G20180
GO:0009959ISOPLAZA Integrative Orthologynegative gravitropismAT2G20180
GO:0010187ISOPLAZA Integrative Orthologynegative regulation of seed germinationAT2G20180
GO:0015995ISOPLAZA Integrative Orthologychlorophyll biosynthetic processAT2G20180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT2G20180
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT2G20180
GO:0010313ISOPLAZA Integrative Orthologyphytochrome bindingAT2G20180
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT2G20180
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G20180
GO:0005488IEAPLAZA HomologybindingHOM03D000046

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G20180

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBbHLH
PlantTFDBbHLH