Gene: PT01G02550 (Populus trichocarpa)

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Gene Identifier
PT01G02550
Transcript Identifier
PT01G02550.1
Gene Type
Coding gene
Location
Chr01 : 1889015-1891292 : negative

Family

Gene family
HOM03D001135
(135 genes in 31 species)
specific family
Subfamily
ORTHO03D014211
(15 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
polymerase V subunit 5C
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.001G025500.1
idPAC:27043761

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEAGenome Projecttranscription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003899IEAGenome ProjectDNA-directed RNA polymerase activity
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D001135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000419ISOPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT3G54490

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005571RNA polymerase, Rpb5, N-terminal
IPR000783RNA polymerase, subunit H/Rpb5 C-terminal

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.