Gene: PT00G00280 (Populus trichocarpa)

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Gene Identifier
PT00G00280
Transcript Identifier
PT00G00280.1
Gene Type
Coding gene
Location
scaffold_139 : 1832-3751 : positive

Family

Gene family
HOM03D000833
(170 genes in 31 species)
specific family
Subfamily
ORTHO03D000939
(62 genes in 25 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
S-alkyl-thiohydroximate lyase SUR1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.T098400.1
idPAC:26983147

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAGenome Projectbiosynthetic process
GO:0006520IEAGenome Projectcellular amino acid metabolic process
GO:0006572ISOPLAZA Tree-based Orthologytyrosine catabolic processAT5G36160
GO:0006559ISOPLAZA Tree-based OrthologyL-phenylalanine catabolic processAT5G36160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016740IEAGenome Projecttransferase activity
GO:0030170IEAGenome Projectpyridoxal phosphate binding
GO:0016829IEAGenome Projectlyase activity
GO:0016769IEAGenome Projecttransferase activity, transferring nitrogenous groups
GO:0008483IEAInterProtransaminase activity
GO:0003824IEAInterProcatalytic activity
GO:0004838ISOPLAZA Tree-based OrthologyL-tyrosine:2-oxoglutarate aminotransferase activityAT5G36160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT5G36160

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015424Pyridoxal phosphate-dependent transferase
IPR004839Aminotransferase, class I/classII
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR005958Tyrosine/nicotianamine aminotransferase

Mapman id Description
13.2.6.2amino acid metabolism.degradation.aromatic aa.tyrosine
No SignalP domains detected for this gene.