Gene: PPE_009G01400 (Prunus persica)

Overview top

Gene Identifier
PPE_009G01400
Transcript Identifier
PPE_009G01400.1
Gene Type
Coding gene
Location
scaffold_9 : 1738757-1743688 : negative

Family

Gene family
HOM03D000044
(1608 genes in 28 species)
specific family
Subfamily
ORTHO03D000343
(99 genes in 11 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Transposon Ty3-G Gag-Pol polyprotein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidppa020671m
idPAC:17660718

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006278IEAGenome ProjectRNA-dependent DNA replication
GO:0015074IEAGenome ProjectDNA integration
GO:0006259IEAPLAZA HomologyDNA metabolic processHOM03D000044

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEAGenome ProjectRNA binding
GO:0003964IEAGenome ProjectRNA-directed DNA polymerase activity
GO:0003676IEAGenome Projectnucleic acid binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0003677IEAGenome ProjectDNA binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000477Reverse transcriptase
IPR000953Chromo domain/shadow
IPR012337Ribonuclease H-like domain
IPR016197Chromo domain-like
IPR001584Integrase, catalytic core
IPR015416Zinc finger, H2C2-type, histone UAS binding
IPR023780Chromo domain

Mapman id Description
27.2RNA.transcription
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network