PLAZA 3.0 Dicots gene overview : PPE_008G04300

Gene: PPE_008G04300 (Prunus persica)

Overview

Gene Identifier: PPE_008G04300
Transcript Identifier: PPE_008G04300.1
Gene Type: Coding gene
Location: scaffold_8 : 3965070-3968061 : negative

Family

Gene family: HOM03D001383
(114 genes in 31 species)
specific family
Subfamily: ORTHO03D006642
(32 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine): factor C subunit 2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	ppa008426m
id	PAC:17656046

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006260	IEA	Genome Project	DNA replication

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0003689	IEA	Genome Project	DNA clamp loader activity
GO:0017111	IEA	InterPro	nucleoside-triphosphatase activity
GO:0000166	IEA	InterPro	nucleotide binding
GO:0003677	IEA	InterPro	DNA binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005663	IEA	Genome Project	DNA replication factor C complex

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003593	AAA+ ATPase domain
IPR003959	ATPase, AAA-type, core
IPR013748	Replication factor C, C-terminal domain

Mapman id	Description
28.1	DNA.synthesis/chromatin structure

No SignalP domains detected for this gene.