PLAZA 3.0 Dicots gene overview : PPE_002G18450

Gene: PPE_002G18450 (Prunus persica)

Overview

Gene Identifier: PPE_002G18450
Transcript Identifier: PPE_002G18450.1
Gene Type: Coding gene
Location: scaffold_2 : 19474595-19475139 : negative

Family

Gene family: HOM03D000083
(1103 genes in 29 species)
specific family
Subfamily: ORTHO03D015746
(11 genes in 9 species)
specific family

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Descriptions

Description (AnnoMine): LOB domain-containing protein

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	ppa025888m
id	PAC:17668120

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR004883	Lateral organ boundaries, LOB

Mapman id	Description
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family

No SignalP domains detected for this gene.

Database	Type
PlantTFDB	LBD