Gene: PPE_002G10980 (Prunus persica)

Overview top

Gene Identifier
PPE_002G10980
Transcript Identifier
PPE_002G10980.1
Gene Type
Coding gene
Location
scaffold_2 : 13687709-13689728 : positive

Family

Gene family
HOM03D005068
(41 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Chromo domain protein LHP1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidppa021305m
idPAC:17662079

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010016ISOPLAZA Integrative Orthologyshoot system morphogenesisAT5G17690
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT5G17690
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT5G17690
GO:0009825ISOPLAZA Integrative Orthologymultidimensional cell growthAT5G17690
GO:0045857ISOPLAZA Integrative Orthologynegative regulation of molecular function, epigeneticAT5G17690
GO:0009648ISOPLAZA Integrative OrthologyphotoperiodismAT5G17690
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT5G17690
GO:0010048ISOPLAZA Integrative Orthologyvernalization responseAT5G17690
GO:0006342ISOPLAZA Integrative Orthologychromatin silencingAT5G17690
GO:0045814ISOPLAZA Integrative Orthologynegative regulation of gene expression, epigeneticAT5G17690
GO:0006325ISOPLAZA Integrative Orthologychromatin organizationAT5G17690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003935ISOPLAZA Integrative OrthologyGTP cyclohydrolase II activityAT5G17690
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G17690
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT5G17690
GO:0035064ISOPLAZA Integrative Orthologymethylated histone residue bindingAT5G17690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G17690
GO:0005720ISOPLAZA Integrative Orthologynuclear heterochromatinAT5G17690
GO:0000791ISOPLAZA Integrative OrthologyeuchromatinAT5G17690
GO:0005634IEAPLAZA HomologynucleusHOM03D005068

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000953Chromo domain/shadow
IPR017984Chromo domain subgroup
IPR023780Chromo domain
IPR016197Chromo domain-like
IPR023779Chromo domain, conserved site

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.