PLAZA 3.0 Dicots gene overview : PP00429G00120

Gene: PP00429G00120 (Physcomitrella patens)

Overview

Gene Identifier: PP00429G00120
Transcript Identifier: PP00429G00120.1
Gene Type: Coding gene
Location: scaffold_429 : 211134-213065 : negative

Family

Gene family: HOM03D002466
(73 genes in 31 species)
specific family
Subfamily: ORTHO03D005483
(34 genes in 28 species)
specific family

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Descriptions

Description (AnnoMine): Probable calcium-binding protein CML21

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Pp1s429_31V6.2
id	PAC:18043183

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005509	IEA	InterPro	calcium ion binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT4G26470

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002048	EF-hand domain
IPR011992	EF-hand domain pair
IPR018247	EF-Hand 1, calcium-binding site

Mapman id	Description
30.3	signalling.calcium

No SignalP domains detected for this gene.