Gene: PP00373G00040 (Physcomitrella patens)

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Gene Identifier
PP00373G00040
Transcript Identifier
PP00373G00040.1
Gene Type
Coding gene
Location
scaffold_373 : 86332-87654 : positive

Family

Gene family
HOM03D000582
(230 genes in 29 species)
specific family
Subfamily
ORTHO03D002649
(40 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
SHI RELATED SEQUENCE
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s373_11V6.1
idPAC:18059452

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009938ISOPLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathwayAT5G66350
GO:0009740ISOPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT5G66350
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT5G66350
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT5G12330
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT5G12330
GO:0010252ISOPLAZA Integrative Orthologyauxin homeostasisAT4G36260 AT3G51060
GO:0048480ISOPLAZA Integrative Orthologystigma developmentAT4G36260 AT3G51060
GO:0048479ISOPLAZA Integrative Orthologystyle developmentAT4G36260 AT3G51060
GO:0010051ISOPLAZA Integrative Orthologyxylem and phloem pattern formationAT4G36260 AT3G51060
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT3G51060
GO:0009299ISOPLAZA Integrative OrthologymRNA transcriptionAT1G19790

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT5G66350 AT3G51060
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT5G66350
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT5G12330
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT3G51060

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G66350 AT3G51060 AT1G19790

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007818Protein of unknown function DUF702
IPR006511Lateral Root Primordium type 1, C-terminal
IPR006510Zinc finger, lateral root primordium type 1

Mapman id Description
27.3.11RNA.regulation of transcription.C2H2 zinc finger family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSRS
PlantTFDBSRS