Gene: PP00352G00250 (Physcomitrella patens)

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Gene Identifier
PP00352G00250
Transcript Identifier
PP00352G00250.1
Gene Type
Coding gene
Location
scaffold_352 : 347277-348117 : negative

Family

Gene family
HOM03D000979
(152 genes in 31 species)
specific family
Subfamily
ORTHO03D000465
(86 genes in 29 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
carboxylase small chain, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s352_62V6.1
idPAC:18054691

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015977IEAGenome Projectcarbon fixation
GO:0010218ISOPLAZA Integrative Orthologyresponse to far red lightAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0010114ISOPLAZA Integrative Orthologyresponse to red lightAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0009637ISOPLAZA Integrative Orthologyresponse to blue lightAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0080158ISOPLAZA Integrative Orthologychloroplast ribulose bisphosphate carboxylase complex biogenesisAT5G38410 AT1G67090
GO:0015979ISOPLAZA Integrative OrthologyphotosynthesisAT5G38410 AT1G67090
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT1G67090

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016984IEAGenome Projectribulose-bisphosphate carboxylase activity
GO:0005507ISOPLAZA Integrative Orthologycopper ion bindingAT1G67090

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536ISOPLAZA Integrative OrthologyplastidOS12G17600
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT5G38430 AT5G38420 AT5G38410 AT1G67090
GO:0022626ISOPLAZA Integrative Orthologycytosolic ribosomeAT5G38420 AT5G38410 AT1G67090
GO:0005618ISOPLAZA Integrative Orthologycell wallAT5G38410
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT1G67090
GO:0031977ISOPLAZA Integrative Orthologythylakoid lumenAT1G67090

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR024681Ribulose bisphosphate carboxylase, small chain
IPR000894Ribulose bisphosphate carboxylase small chain, domain
IPR010916TonB box, conserved site

Mapman id Description
1.3.2PS.calvin cycle.rubisco small subunit
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network