Gene: PP00219G00090 (Physcomitrella patens)

Overview top

Gene Identifier
PP00219G00090
Transcript Identifier
PP00219G00090.1
Gene Type
Coding gene
Location
scaffold_219 : 140199-145417 : positive

Family

Gene family
HOM03D003830
(49 genes in 31 species)
specific family
Subfamily
ORTHO03D004389
(36 genes in 31 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
synthase [NAD(P)(+)]-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s219_23V6.1
idPAC:18039189

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008033IEAGenome ProjecttRNA processing
GO:0055114IEAGenome Projectoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0017150IEAGenome ProjecttRNA dihydrouridine synthase activity
GO:0050660IEAGenome Projectflavin adenine dinucleotide binding
GO:0003824IEAInterProcatalytic activity
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT4G38890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013785Aldolase-type TIM barrel
IPR001269tRNA-dihydrouridine synthase
IPR000571Zinc finger, CCCH-type
IPR018517tRNA-dihydrouridine synthase, conserved site

Mapman id Description
29.1protein.aa activation
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBC3H