Gene: PP00138G00180 (Physcomitrella patens)

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Gene Identifier
PP00138G00180
Transcript Identifier
PP00138G00180.1
Gene Type
Coding gene
Location
scaffold_138 : 168915-173035 : negative

Family

Gene family
HOM03D001246
(123 genes in 31 species)
specific family
Subfamily
ORTHO03D005247
(34 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
factor 3 subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s138_36V6.1
idPAC:18060474

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006413IEAGenome Projecttranslational initiation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0003743IEAGenome Projecttranslation initiation factor activity
GO:0003723IEAGenome ProjectRNA binding
GO:0005515IEAInterProprotein binding
GO:0000166IEAInterPronucleotide binding
GO:0031369IEAInterProtranslation initiation factor binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D001246

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005852IEAInterProeukaryotic translation initiation factor 3 complex
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G27640 AT5G25780
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G27640 AT5G25780
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G25780

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR011042Six-bladed beta-propeller, TolB-like
IPR011400Eukaryotic translation initiation factor 3 subunit B
IPR012677Nucleotide-binding, alpha-beta plait
IPR013979Translation initiation factor, beta propellor-like domain
IPR015943WD40/YVTN repeat-like-containing domain

Mapman id Description
29.2.3protein.synthesis.initiation
No SignalP domains detected for this gene.