Gene: PP00053G01140 (Physcomitrella patens)

Overview top

Gene Identifier
PP00053G01140
Transcript Identifier
PP00053G01140.1
Gene Type
Coding gene
Location
scaffold_53 : 1515221-1520323 : positive

Family

Gene family
HOM03D003739
(50 genes in 31 species)
specific family
Subfamily
ORTHO03D007344
(31 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
pore complex protein Nup88
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s53_228V6.1
idPAC:18046334

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045087ISOPLAZA Integrative Orthologyinnate immune responseAT5G05680
GO:0009627ISOPLAZA Integrative Orthologysystemic acquired resistanceAT5G05680
GO:0006611ISOPLAZA Integrative Orthologyprotein export from nucleusAT5G05680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643ISOPLAZA Integrative Orthologynuclear poreAT5G05680
GO:0005635ISOPLAZA Integrative Orthologynuclear envelopeAT5G05680

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017986WD40-repeat-containing domain
IPR019321Nucleoporin Nup88
IPR015943WD40/YVTN repeat-like-containing domain

Mapman id Description
29.3.1protein.targeting.nucleus
No SignalP domains detected for this gene.