Gene: PP00040G01300 (Physcomitrella patens)

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Gene Identifier
PP00040G01300
Transcript Identifier
PP00040G01300.1
Gene Type
Coding gene
Location
scaffold_40 : 2262503-2266771 : positive

Family

Gene family
HOM03D001254
(123 genes in 31 species)
specific family
Subfamily
ORTHO03D008912
(29 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Uncharacterized RING finger protein EEED8.16
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s40_296V6.1
idPAC:18069987

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT2G42160 AT2G26000

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAInterProprotein binding
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT2G42160 AT2G26000
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G42160 AT2G26000
GO:0043130ISOPLAZA Integrative Orthologyubiquitin bindingAT2G26000

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT2G42160 AT2G26000

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011422BRCA1-associated 2
IPR001607Zinc finger, UBP-type
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.