Gene: PP00018G01360 (Physcomitrella patens)

Overview top

Gene Identifier
PP00018G01360
Transcript Identifier
PP00018G01360.1
Gene Type
Coding gene
Location
scaffold_18 : 2019778-2023944 : positive

Family

Gene family
HOM03D000135
(738 genes in 31 species)
specific family
Subfamily
ORTHO03D000040
(252 genes in 31 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
splicing factor ATP-dependent RNA helicase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s18_265V6.1
idPAC:18040516

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004386IEAGenome Projecthelicase activity
GO:0005524IEAGenome ProjectATP binding
GO:0008026IEAGenome ProjectATP-dependent helicase activity
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000135
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000135
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000135
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03D000135
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000135
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000135
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000135
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000135
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000135
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000135
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000135
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000135
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000135
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000135
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000135
GO:0016887IEAPLAZA HomologyATPase activityHOM03D000135
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000135
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000135
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000135
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000135
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000135
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000135
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03D000135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT2G47250
GO:0016020ISOPLAZA Integrative OrthologymembraneAT2G47250
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT3G62310
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G62310

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR011709Domain of unknown function DUF1605
IPR007502Helicase-associated domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR001650Helicase, C-terminal

Mapman id Description
27.1.2RNA.processing.RNA helicase
No SignalP domains detected for this gene.