Gene: OS10G11200 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS10G11200
Transcript Identifier
OS10G11200.1
Gene Type
Coding gene
Location
10 : 6209311-6213409 : negative

Family

Gene family
HOM03D002918
(62 genes in 31 species)
specific family
Subfamily
ORTHO03D002122
(43 genes in 31 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
aminotransferase, classes I and II, domain containing protein, expressed
Description
Long chain base biosynthesis protein 1c
Description (AnnoMine)
base biosynthesis protein 1c

Identifiers

Identifier Name
transcript_idLOC_OS10G11200.1
uniprotQ7G4P2

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAUniProtbiosynthetic process1 2 3 4 5
GO:0006665IEAUniProtsphingolipid metabolic process1 2 3 4 5
GO:0016049ISOPLAZA Integrative Orthologycell growthAT4G36480
GO:0030148ISOPLAZA Integrative Orthologysphingolipid biosynthetic processAT4G36480
GO:0043067ISOPLAZA Integrative Orthologyregulation of programmed cell deathAT4G36480

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030170IEAUniProtpyridoxal phosphate binding1 2 3 4 5
GO:0003824IEAInterProcatalytic activity
GO:0004758IEAUniProtserine C-palmitoyltransferase activity1 2 3 4 5
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G36480

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005789IEAUniProtendoplasmic reticulum membrane1 2 3 4 5
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT4G36480

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015424Pyridoxal phosphate-dependent transferase
IPR004839Aminotransferase, class I/classII
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2

Mapman id Description
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids
No SignalP domains detected for this gene.