PLAZA 3.0 Dicots gene overview : OS09G32680

Gene: OS09G32680 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS09G32680
Transcript Identifier: OS09G32680.1
Gene Type: Coding gene
Location: 9 : 19499074-19502780 : positive

Family

Gene family: HOM03D004215
(46 genes in 28 species)
specific family
Subfamily: ORTHO03D006943
(32 genes in 28 species)
specific family

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Descriptions

Description: cyclin, putative, expressed

Description: Cyclin-C1-1

Description (AnnoMine): Cyclin-C1-1

Identifiers

Identifier	Name
transcript_id	LOC_OS09G32680.1
uniprot	P93411

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006355	IEA	UniProt	regulation of transcription, DNA-dependent	1 2
GO:0000079	IEA	UniProt	regulation of cyclin-dependent protein serine/threonine kinase activity	1 2
GO:0007049	IEA	UniProt	cell cycle	1 2
GO:0051301	IEA	UniProt	cell division	1 2
GO:2001141	IEA	PLAZA Homology	regulation of RNA biosynthetic process	HOM03D004215

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0019901	IEA	InterPro	protein kinase binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016591	IEA	UniProt	DNA-directed RNA polymerase II, holoenzyme	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013763	Cyclin-like
IPR015429	Cyclin C/H/T/L
IPR006671	Cyclin, N-terminal

Mapman id	Description
31.3	cell.cycle

No SignalP domains detected for this gene.