Gene: OS06G16370 (Oryza sativa ssp. japonica)

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Gene Identifier
OS06G16370
Transcript Identifier
OS06G16370.1
Gene Type
Coding gene
Location
6 : 9336535-9338359 : positive

Family

Gene family
HOM03D000235
(450 genes in 31 species)
specific family
Subfamily
ORTHO03D004723
(35 genes in 26 species)
specific family

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Descriptions

Description
CCT%2FB-box zinc finger protein, putative, expressed
Description
Zinc finger protein HD1
Description (AnnoMine)
finger protein HD1

Identifiers

Identifier Name
transcript_idLOC_OS06G16370.1
uniprotQ9FDX8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010229IGIUniProtinflorescence developmentGR_REF:51271 2 3 4 5 6 7
GO:0048571IGI, IEPUniProtlong-day photoperiodismGR_REF:51271 GR_REF:51272 3 4 5 6 7 8
GO:0048572IGI, IEPUniProtshort-day photoperiodismGR_REF:51271 GR_REF:51272 3 4 5 6 7 8
GO:0009648ICGene OntologyphotoperiodismGR_REF:11089
GO:0030154IEAUniProtcell differentiation1 2 3 4 5 6
GO:0009908IEAUniProtflower development1 2 3 4 5 6
GO:0048579IMPUniProtnegative regulation of long-day photoperiodism, flowering1 2 3 4 5 6
GO:0045892IMPUniProtnegative regulation of transcription, DNA-dependent1 2 3 4 5 6
GO:0048576IMPUniProtpositive regulation of short-day photoperiodism, flowering1 2 3 4 5 6
GO:0009909IMPUniProtregulation of flower development1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT5G15850 AT5G15840
GO:0010018ISOPLAZA Integrative Orthologyfar-red light signaling pathwayAT5G15840
GO:0010218ISOPLAZA Integrative Orthologyresponse to far red lightAT5G15840
GO:0009658ISOPLAZA Integrative Orthologychloroplast organizationAT3G02380

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISS, RCAUniProtDNA bindingGR_REF:51271 GR_REF:80302 3 4 5 6 7
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activityGR_REF:51271 2 3 4 5 6 7
GO:0008270IEA, ISS, RCAUniProtzinc ion bindingGR_REF:51271 GR_REF:80302 3 4 5 6 7
GO:0005515IEAInterProprotein binding
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT5G15850
GO:0043169IEAPLAZA Homologycation bindingHOM03D000235
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000235
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000235

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISSUniProtnucleusGR_REF:51271 2 3 4 5 6 7
GO:0005622IEAInterProintracellular
GO:0044464IEAPLAZA Homologycell partHOM03D000235
GO:0005623IEAPLAZA HomologycellHOM03D000235

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000315Zinc finger, B-box
IPR010402CCT domain

Mapman id Description
33.99development.unspecified
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC2C2-CO-like
PlantTFDBCO-like