PLAZA 3.0 Dicots gene overview : OS06G06320

Gene: OS06G06320 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS06G06320
Transcript Identifier: OS06G06320.1
Gene Type: Coding gene
Location: 6 : 2940156-2942297 : positive

Family

Gene family: HOM03D000449
(281 genes in 29 species)
specific family
Subfamily: ORTHO03D005947
(33 genes in 26 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description: osFTL2 FT-Like2 homologous to Flowering Locus T gene%3B contains Pfam profile PF01161%3A Phosphatidylethanolamine-binding protein, expressed

Description: Protein HEADING DATE 3A

Description (AnnoMine): TWIN SISTER of FT

Identifiers

Identifier	Name
transcript_id	LOC_OS06G06320.1
uniprot	Q93WI9

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010229	IMP	UniProt	inflorescence development	GR_REF:95151 2 3 4 5 6 7 8 9 10
GO:0048510	IMP	UniProt	regulation of timing of transition from vegetative to reproductive phase	GR_REF:95151 2 3 4 5 6 7 8 9 10
GO:0048572	IMP	Gene Ontology	short-day photoperiodism	GR_REF:95151
GO:0009648	IC	Gene Ontology	photoperiodism	GR_REF:11089
GO:0030154	IEA	UniProt	cell differentiation	1 2 3 4 5 6 7 8 9
GO:0009908	IEA	UniProt	flower development	1 2 3 4 5 6 7 8 9
GO:0009909	IMP	UniProt	regulation of flower development	1 2 3 4 5 6 7 8 9
GO:0048575	IMP	UniProt	short-day photoperiodism, flowering	1 2 3 4 5 6 7 8 9

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008429	ISS	UniProt	phosphatidylethanolamine binding	GR_REF:95151 2 3 4 5 6 7 8 9 10
GO:0003700	IC	Gene Ontology	sequence-specific DNA binding transcription factor activity	GR_REF:11089

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	UniProt	cytoplasm	1 2 3 4 5 6 7 8 9
GO:0005634	IEA	UniProt	nucleus	1 2 3 4 5 6 7 8 9

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001858	Phosphatidylethanolamine-binding, conserved site
IPR008914	Phosphatidylethanolamine-binding protein PEBP

Mapman id	Description
33.99	development.unspecified

No SignalP domains detected for this gene.