Gene: OS04G42990 (Oryza sativa ssp. japonica)

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Gene Identifier
OS04G42990
Transcript Identifier
OS04G42990.1
Gene Type
Coding gene
Location
4 : 25435640-25438870 : negative

Family

Gene family
HOM03D005890
(37 genes in 31 species)
specific family

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Descriptions

Description
suppressor of stem-loop protein 1, putative, expressed
Description (AnnoMine)
transcription factor IIH subunit 2

Identifiers

Identifier Name
transcript_idLOC_OS04G42990.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0006289IEAInterPronucleotide-excision repair
GO:0006351IEAInterProtranscription, DNA-templated
GO:0006357ISOPLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoterAT1G05055

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000439IEAInterProcore TFIIH complex
GO:0005675ISOPLAZA Integrative Orthologyholo TFIIH complexAT1G05055
GO:0000441IEAPLAZA HomologySSL2-core TFIIH complexHOM03D005890
GO:0032806IEAPLAZA Homologycarboxy-terminal domain protein kinase complexHOM03D005890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002035von Willebrand factor, type A
IPR012170TFIIH subunit Ssl1/p44
IPR007087Zinc finger, C2H2
IPR004595TFIIH C1-like domain
IPR007198Ssl1-like

Mapman id Description
27.2RNA.transcription
27.3.99RNA.regulation of transcription.unclassified
No SignalP domains detected for this gene.