Gene: OS04G40840 (Oryza sativa ssp. japonica)

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Gene Identifier
OS04G40840
Transcript Identifier
OS04G40840.1
Gene Type
Coding gene
Location
4 : 24237289-24240663 : negative

Family

Gene family
HOM03D001718
(96 genes in 30 species)
specific family

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Descriptions

Description
elongator complex protein 3, putative, expressed
Description
Elongator complex protein 3
Description (AnnoMine)
Elongator complex protein 3

Identifiers

Identifier Name
transcript_idLOC_OS04G40840.1
uniprotQ7X7L3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016573IEAUniProthistone acetylation1 2
GO:0006355IEAUniProtregulation of transcription, DNA-dependent1 2
GO:0006351IEAUniProttranscription, DNA-templated1 2
GO:2000025ISOPLAZA Integrative Orthologyregulation of leaf formationAT5G50320
GO:0010084ISOPLAZA Integrative Orthologyspecification of organ axis polarityAT5G50320
GO:0002098ISOPLAZA Integrative OrthologytRNA wobble uridine modificationAT5G50320
GO:0010928ISOPLAZA Integrative Orthologyregulation of auxin mediated signaling pathwayAT5G50320
GO:0035265ISOPLAZA Integrative Orthologyorgan growthAT5G50320
GO:0009294ISOPLAZA Integrative OrthologyDNA mediated transformationAT5G50320
GO:0008283ISOPLAZA Integrative Orthologycell proliferationAT5G50320
GO:0008152IEAPLAZA Homologymetabolic processHOM03D001718

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008080IEAInterProN-acetyltransferase activity
GO:0051536IEAUniProtiron-sulfur cluster binding1 2
GO:0003824IEAInterProcatalytic activity
GO:0004402IEAUniProthistone acetyltransferase activity1 2
GO:0046872IEAUniProtmetal ion binding1 2
GO:0051540IEAPLAZA Homologymetal cluster bindingHOM03D001718

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAUniProtnucleus1 2
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G50320
GO:0033588ISOPLAZA Integrative OrthologyElongator holoenzyme complexAT5G50320
GO:0005719ISOPLAZA Integrative Orthologynuclear euchromatinAT5G50320

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006638Elongator protein 3/MiaB/NifB
IPR023404Radical SAM, alpha/beta horseshoe
IPR000182GNAT domain
IPR016181Acyl-CoA N-acyltransferase
IPR005910Histone acetyltransferase ELP3
IPR007197Radical SAM

Mapman id Description
27.3.54RNA.regulation of transcription.Histone acetyltransferases
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBGNAT