Gene: OS03G52170 (Oryza sativa ssp. japonica)

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Gene Identifier
OS03G52170
Transcript Identifier
OS03G52170.1
Gene Type
Coding gene
Location
3 : 29951043-29953794 : negative

Family

Gene family
HOM03D003312
(55 genes in 31 species)
specific family
Subfamily
ORTHO03D002245
(43 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed
Description
4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
Description (AnnoMine)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic

Identifiers

Identifier Name
transcript_idLOC_OS03G52170.1
uniprotQ6AVG6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016114ICGene Ontologyterpenoid biosynthetic processGR_REF:11089
GO:0019288IEAUniProtisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1 2 3 4
GO:0055114IEAInterProoxidation-reduction process
GO:0050992IEAUniProtdimethylallyl diphosphate biosynthetic process1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0051745IEA, ICUniProt4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activityGR_REF:110891 2 3 4
GO:0051538IEAUniProt3 iron, 4 sulfur cluster binding1 2 3 4
GO:0046872IEAUniProtmetal ion binding1 2 3 4
GO:0046429ISOPLAZA Integrative Orthology4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activityAT4G34350

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536RCAGene OntologyplastidGR_REF:7047
GO:0009570IEAUniProtchloroplast stroma1 2 3 4
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G34350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003451LytB protein

Mapman id Description
16.1.1.7secondary metabolism.isoprenoids.non-mevalonate pathway.HDR
No SignalP domains detected for this gene.