Gene: OS02G56300 (Oryza sativa ssp. japonica)

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Gene Identifier
OS02G56300
Transcript Identifier
OS02G56300.1
Gene Type
Coding gene
Location
2 : 34463472-34466850 : positive

Family

Gene family
HOM03D002918
(62 genes in 31 species)
specific family
Subfamily
ORTHO03D002122
(43 genes in 31 species)
specific family

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Descriptions

Description
aminotransferase, classes I and II, domain containing protein, expressed
Description
Long chain base biosynthesis protein 1b
Description (AnnoMine)
base biosynthesis protein 1c

Identifiers

Identifier Name
transcript_idLOC_OS02G56300.1
uniprotQ6K8E7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAUniProtbiosynthetic process1 2 3 4
GO:0006665IEAUniProtsphingolipid metabolic process1 2 3 4
GO:0030148ISOPLAZA Integrative Orthologysphingolipid biosynthetic processAT4G36480
GO:0043067ISOPLAZA Integrative Orthologyregulation of programmed cell deathAT4G36480
GO:0016049ISOPLAZA Integrative Orthologycell growthAT4G36480

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030170IEAUniProtpyridoxal phosphate binding1 2 3 4
GO:0003824IEAInterProcatalytic activity
GO:0004758IEAUniProtserine C-palmitoyltransferase activity1 2 3 4
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G36480

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005789IEAUniProtendoplasmic reticulum membrane1 2 3 4
GO:0016021IEAUniProtintegral to membrane1 2 3 4
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT4G36480

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004839Aminotransferase, class I/classII
IPR015424Pyridoxal phosphate-dependent transferase
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2

Mapman id Description
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids
No SignalP domains detected for this gene.