Gene: OS02G40390 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS02G40390
Transcript Identifier
OS02G40390.1
Gene Type
Transposon
Location
2 : 24451753-24457908 : negative

Family

No gene family defined for this gene.

Loading...please wait

Descriptions

Description
retrotransposon protein, putative, unclassified, expressed

Identifiers

Identifier Name
transcript_idLOC_OS02G40390.1

Toolbox

Explore

  • ...the colinearity of this gene with other genomes.
  • ...the local gene organization for homologous genes.
  • ...the phylogenetic tree of the homologous gene family.
  • ...the orthologs using the Integrative Orthology Viewer.
  • ...the conserved binding sites (upstream/downstream,intron)

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015074IEAInterProDNA integration
GO:0006278IEAInterProRNA-dependent DNA replication

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004523IEAInterProribonuclease H activity
GO:0003723IEAInterProRNA binding
GO:0003964IEAInterProRNA-directed DNA polymerase activity
GO:0003676IEAInterPronucleic acid binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012337Ribonuclease H-like domain
IPR001584Integrase, catalytic core
IPR000477Reverse transcriptase
IPR002156Ribonuclease H domain
IPR005162Retrotransposon gag domain

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.