Gene: OS01G70360 (Oryza sativa ssp. japonica)

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Gene Identifier
OS01G70360
Transcript Identifier
OS01G70360.1
Gene Type
Coding gene
Location
1 : 40759635-40763789 : negative

Family

Gene family
HOM03D002277
(77 genes in 30 species)
specific family
Subfamily
ORTHO03D001252
(54 genes in 30 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
serine palmitoyltransferase 2, putative, expressed
Description
Long chain base biosynthesis protein 2b
Description (AnnoMine)
base biosynthesis protein 2b

Identifiers

Identifier Name
transcript_idLOC_OS01G70360.1
uniprotQ8RYL1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEA, RCAUniProtbiosynthetic processGR_REF:80301 2 3 4
GO:0008152IEAInterPrometabolic process
GO:0006665IEAUniProtsphingolipid metabolic process1 2 3 4
GO:0009640ISOPLAZA Integrative OrthologyphotomorphogenesisAT5G23670 AT3G48780
GO:0043067ISOPLAZA Integrative Orthologyregulation of programmed cell deathAT5G23670
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT5G23670 AT3G48780
GO:0046512ISOPLAZA Integrative Orthologysphingosine biosynthetic processAT5G23670
GO:0030148ISOPLAZA Integrative Orthologysphingolipid biosynthetic processAT3G48780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008483RCAGene Ontologytransaminase activityGR_REF:8030
GO:0030170IEAUniProtpyridoxal phosphate binding1 2 3 4
GO:0003824IEAInterProcatalytic activity
GO:0016740IEAInterProtransferase activity
GO:0004758IEAUniProtserine C-palmitoyltransferase activity1 2 3 4
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G23670

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016023RCAGene Ontologycytoplasmic membrane-bounded vesicleGR_REF:7047
GO:0005789IEAUniProtendoplasmic reticulum membrane1 2 3 4
GO:0016021IEAUniProtintegral to membrane1 2 3 4
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT5G23670
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G23670
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT5G23670

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001917Aminotransferase, class-II, pyridoxal-phosphate binding site
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR004839Aminotransferase, class I/classII
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
11.8.1.2lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase
No SignalP domains detected for this gene.