Gene: OL09G02610 (Ostreococcus lucimarinus)

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Gene Identifier
OL09G02610
Transcript Identifier
OL09G02610.1
Gene Type
Coding gene
Location
Chr_9 : 405178-407568 : positive

Family

Gene family
HOM03D000186
(550 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
Regulator of nonsense transcripts 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
namegwEuk.9.31.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000184IEAInterPronuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingAT5G47010
GO:0009863ISOPLAZA Integrative Orthologysalicylic acid mediated signaling pathwayAT5G47010
GO:0048571ISOPLAZA Integrative Orthologylong-day photoperiodismAT5G47010
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT5G47010
GO:0009744ISOPLAZA Integrative Orthologyresponse to sucroseAT5G47010
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT5G47010
GO:0010182ISOPLAZA Integrative Orthologysugar mediated signaling pathwayAT5G47010
GO:0016246ISOPLAZA Integrative OrthologyRNA interferenceAT5G47010

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0008026IEAGenome ProjectATP-dependent helicase activity
GO:0000166IEAGenome Projectnucleotide binding
GO:0017111IEAGenome Projectnucleoside-triphosphatase activity
GO:0004386IEAInterProhelicase activity
GO:0008270IEAInterProzinc ion binding
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G47010
GO:0000932ISOPLAZA Integrative Orthologycytoplasmic mRNA processing bodyAT5G47010
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G47010
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G47010

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003593AAA+ ATPase domain
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR018999RNA helicase UPF1, UPF2-interacting domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.